PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A13G2006
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 306aa    MW: 34419.4 Da    PI: 9.4275
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A13G2006genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1301.1e-09235281549
                  CHHHCHHHHHHHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKka..eieeLeekvkeLeaeNkaLkkel 49 
                  +r rrk+kNRe+A rsR+RK+a  +  eL +kv  Le+ N +Lk e 
  Gh_A13G2006 235 RRLRRKIKNRESAARSRARKQAraYHNELVNKVSRLEEDNLKLKREK 281
                  5889****************97225689************9999774 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0023231300IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.8E-8235282No hitNo description
CDDcd147076.45E-15235291No hitNo description
SuperFamilySSF579591.59E-6235284No hitNo description
PfamPF001706.0E-8235282IPR004827Basic-leucine zipper domain
PROSITE patternPS000360238253IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MGIQTMGSQS NGQQSLLQPS PLVRQNSWYS LTLNEVENQL GNLGKPLGSI NLDELLDNVW  60
STELNPPLGM NNSESISSSS SSLHRQASLT LARALSGKTV DQVWSEIQQG QKRRNGEGMK  120
DQEREAKLGE TTLEDFLVQA GLFVAETSLD PTMEFDNTRQ QSLPHQFRLS PTPSIGTLSD  180
TPMTGQKRDV FEKSIESLPQ QFGLSPTPSI GTLSDTPMTG RKRDAQDAFE KSIERRLRRK  240
IKNRESAARS RARKQARAYH NELVNKVSRL EEDNLKLKRE KEFDTKSQCE TSETRYQLRR  300
TSSASF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012462032.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7
RefseqXP_012462031.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7
TrEMBLA0A0D2U7K40.0A0A0D2U7K4_G
STRINGPOPTR_0001s22790.11e-104(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM167141012
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.31e-40bZIP family protein